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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91089053
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFLLTTGFP VHKRCPDSGA RASRMPVEED YGRRQITLQQ HASQSPVPPS LQCPVGCIPA  60
   61 PADHRYASDK NLLDPSERYS DRFGSERSNS DRLPSGERYQ GVSERYPLGE RPQTSVSSER 120
  121 LQPAEERTQF QTERYHYATC QRYPERYTPV GSLDRYHTHT VDRYSRTSTP TDRYHTLSDK 180
  181 DKTNASDRYT PIEKYQGENF SANDRHNSAQ SVCSIERYTP TERHRSKSSD MYKIRERSSS 240
  241 SDRKTERYQQ YQNRYDQYVP ERFPAIPCPE RFATQERNER VPFTQVPYME PPSPAPASDR 300
  301 FVPPPPLSPE NTPSPDCFPN NAFPSPTNTV PPPPERFIPP PPLSPSPTEK YSPKKVERYE 360
  361 KQQRYYDRYH RTQYYPQNER YHVNPDRFVT NDRYIPPNAH MPVERYVPQQ QEPYYNTYQT 420
  421 YERYPKFNAN DPYMRRDLAF HYRLPLPYSS TQYQRIRYVG TPNRVKCCQY QEGYQLSKSS 480
  481 PGSSSSSSVT SQGKDLHQKE VQCVNNSSLQ EMQCQSYQTC AYQQEKGTQC GKECVGFVSP 540
  541 NLRAKGQCRH SICASPSVEY VGASGGRHVC ATPPPRGSIG SADGAVCNDN CCTARRAQNS 600
  601 LTVAVWLPMI AEFKHTAANL IIVEYDTEPY WGKCVNARAG LLSISMSRGR RRLRSRQPAQ 660
  661 QQPSPPQQRA ATPVPEDAAA SEPKPSETPE LRQPQHSPKI PPVQRAVSLP ATSPPERPRM 720
  721 QPRLGYTQSE RLPNRPTLAR SLSRKEMIKN YIKKETATFF GVDEESEEKQ QRRWLDRRIR 780
  781 MASRTYGPLK DEYRTLGSTY RRTISEMAPG GRMSGQLQAE RPDVLPGPND VVDTNQERLH 840
  841 EVTVRRKDSV ARMTWDGLSY VVNTLTRHRP RRRSQQSQQS RSFPPDTPYS SSSVEEETFF 900
  901 QKPTSPTSPR PQEEGDTIDR GHEATLQPAY RDRLTIRPGS GGWRRDPHVV LRHEGQNRPA 960
  961 VGGSRVFSSL LDNVLDNSNR RQYGMGWVGR MFGRSMRHSV TQDDKILQQL DDMEDHRPMF1020
 1021 TYWVTTVQIL VLFISLVCYG LGPFGIDLHS RSGQVLVTSL SLQQVDYMEP ANFWFGPRAS1080
 1081 DLIHLGAKFA PCMRIDDKIS QQIDKIRAKE RETACCIRND DSGCVQSSQA DCSLRGLRPT1140
 1141 KTISKWKKWS AGEAGPGGRI SGSVCGLDPK FCDAPASVHP YEWPDDITKW PICRKTNTQF1200
 1201 SIQKRSGSRD KSAEHMVCEV IGHPCCIGIH GQCKITTKEY CDFVQGTFHE EASLCSQVSC1260
 1261 LNDVCGMLPF YFAETPDQFY RLWTSLFLHA GVLQLAVTVL IQYFLMRDLE KLTGSLRIGI1320
 1321 IYIGSGVAGN LASAIFVPYR ADVGPAGSQF GLLACLIVEV LNSWPMLKHP NQALCKLLSI1380
 1381 TLVLFLIGLL PWVDNYAHLF GFVFGFLLSY ALLPFISFGV YERRKKIVLI WVCLVSAGVL1440
 1441 FICLVLLFYI IPVYDCKICS YFNCIPFTRD FCASQNINFK REEPIV

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