YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91088569
Protein type:	Globular with Signal Peptide
Type Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALNLFIKRS LSTSSPMNAV IKNVTVIGGG LMGSGIAQVA AQTGHNVTIV EVNPDLIKKA  60
   61 EDSIAKNLVR VAKKLHKDDP QAANKFVSES QARIKGCTDI AEAVKDSDLV VEAIVENMDV 120
  121 KHKLFKNLDE VAPPKTMFAS NTSSLSITEI ASVTKRKDRF GGLHFFNPVP VMKLLEVVRT 180
  181 PETSQETYEA FMAWGKAVGK TCVTCKDTPG FIVNRLLVPY IAEAIRMMER GDASPRDIDT 240
  241 AMKLGAGYPM GPIELADYVG HDTSHAIMQG WHKKFPDNPL FKPNESVQKL IDEKKLGVKT 300
  301 GEGFYKYTK

Type	Start	End	Confidence
Signal Peptide	1	41	0.39
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	309	0.99