YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91084579
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCPLVLLSSC FVLGFASPLD NELAPNPVDL SYLGPSIFGE PRESKNLEGW DENRPENPEE  60
   61 LGEYAEGDIL FPENARNGLV SKTTRWKDGV VPYEISPFYP PKDVQMIKRA MEIYHKYTCI 120
  121 KFRPKTASDK DYLSIVNGNT GCWSSVGRIT GRQEVNLQSP YCTSKVGTPM HELMHALGFV 180
  181 HEQNRWERDD FVTIAWQNIK NGHEGNFKKA DKGSTDGFGV VYDYRSVMHY SPTAFSTNGK 240
  241 PTIVPKDSSK NVKMGQRDGF SRGDIIKINT MYGCPNKPPG GDVVGGEVSG GGGGGGLLSF 300
  301 LFQIVN

Type	Start	End	Confidence
Signal Peptide	1	18	0.95
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	306	0.99