YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91084573
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCAKSTHKHY ENVQKISDKS GQWSFLTHYF VGNDHRYREN IIIPRTLGPV QIKSNEEKRV  60
   61 EAFFESCPFK SLMSCVMGYG LGAAIGLFSS SVGPTATNVE QQTARQVFQE MKSTTLSYAK 120
  121 NFAMIGALFS AVECSIETMR GKSDWKNGTY AGAVTGGLIG LRAGVKAGVL GAAGFAAFST 180
  181 AIDYYMHSRF

Type	Start	End	Confidence
Cytoplasmic	1	68	0.93
Transmembrane Helix	69	89	0.73
Non-Cytoplasmic	90	157	0.56
Transmembrane Helix	158	186	0.69
Cytoplasmic	187	190	0.45