YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91083873
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPHTSHSD SLHTRSPVPS RRARDVSERV PLVKINDEKP PLAGSETDDD LDDDRETVSK  60
   61 PYPGVDDGFF NGEGIPENEG DVPVITSRAG PDGGSEKPDE VDGPRKPDSG PGRFPYAPNF 120
  121 GTDLEVGSTV PDLESIPDVN VYQHKKTLAQ GMMDLALFSA NANQLRYVLE SFNRHPYYYP 180
  181 SLVLISFSLI FQVAVGIGLI WNSRYNVKDD KEICIANRIN NFTIIGIFLV TVINVFISAF 240
  241 GVANAPTT

Type	Start	End	Confidence
Non-Cytoplasmic	1	177	0.79
Transmembrane Helix	178	201	0.90
Cytoplasmic	202	221	0.80
Transmembrane Helix	222	243	0.93
Non-Cytoplasmic	244	248	0.80