YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91083841
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLVIICAF SLSLAVEDGR YVPDNSGQYV PTDEGQYIPD YSGRYTHDGT GGYKDDGVSS  60
   61 NLLTSNTKPR LVIQPVIDVR TARSSTIRPS TYPPTTRQPL KTYENHQEGK WKIIRQLGDV 120
  121 DTDGYHWEYE TENKIQAEES GKLHNVGTDA ETMRAKGFYQ YTGPDNVVYT VEYTADENGF 180
  181 FPVGNHLPTP PPIPAELLKA LEADRAQNKI

Type	Start	End	Confidence
Signal Peptide	1	15	0.97
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	210	0.99