YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91083261
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRAGEKNEY PKASGYLVNG ALLTYIAGLF LMIAFCSPYW VKSFEETFSQ FKNMGLWEYC  60
   61 FEDFRYPYYQ FDHLFNGCHH VFSQEFHVIR EWILPPWLMA VQAFVTMSFL LSFGSQVIMA 120
  121 LQLCRWPLDF ILRYEWILSA IDFVCVTTTT VFMFFAVAVF GGSHVRRDWL MYPNYNYLCW 180
  181 SYGLAVISFF FHGFAAVCLY YEARQSYKFR RESKSLVMQM QPNPQHNLRW

Type	Start	End	Confidence
Cytoplasmic	1	15	0.95
Transmembrane Helix	16	41	0.82
Non-Cytoplasmic	42	99	0.96
Transmembrane Helix	100	121	0.89
Cytoplasmic	122	137	0.83
Transmembrane Helix	138	160	0.91
Non-Cytoplasmic	161	178	0.90
Transmembrane Helix	179	201	0.94
Cytoplasmic	202	230	0.98