YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91083233
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFDLNEGN FPKPTDITDR TEWVPLSLTL VEYPKGDFIG KILALISLAP FGIGAGFVAL  60
   61 ILFRRDLHTI TFFLGTLCSE ALNYFLKHTI CEERPMRRTD LYGEYGMPSS HAQFVWFFAT 120
  121 YVIYFVFIRL HHMNNNTIIE NMSKILIISS SLVMALLVCV SRIYLQYHTV SQVLCGAFVG 180
  181 VLFATFWFAL TYLVFTPLFP QIVTWKISEI LLLRDTTLIP NVLWFEYTNT RQEVRARSRK 240
  241 LVSMKSQ

Type	Start	End	Confidence
Cytoplasmic	1	41	0.85
Transmembrane Helix	42	63	0.93
Non-Cytoplasmic	64	111	0.58
Transmembrane Helix	112	133	0.86
Cytoplasmic	134	144	0.55
Transmembrane Helix	145	165	0.95
Non-Cytoplasmic	166	172	0.52
Transmembrane Helix	173	196	0.87
Cytoplasmic	197	247	0.60