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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91081617
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKVSQNKT YIAVNIPENS NKAVRKSFWS VFKRDASTKK SKEAPKEVAP ATPRINKADL  60
   61 ARLLSLAKPE KWKLFGAICF LLVSSTVTMS IPFSLGKVLD IIYSSSENSD EARAKLNKVC 120
  121 GVLLCVFVLG AICNFGRVYL MSVSGYRMTQ ALRKRVFSTI MKQEQGWFDK RSTGELVNRL 180
  181 SADTQIVGNA LSSNISDGLR SIVMVCAGTG MMFYMSAELA LVGLAIVPPV AIIAVIYGRF 240
  241 LRGISRKVQD SLAGATSVAE ERIANIRTVK TFSQEPREVD SYANAIKEVL GLSYREAKAR 300
  301 AIFYGLTGFS GHVIIISVLY YGGVMVSSNT ITVGNLSSFL LYAAYIGVSL GTFSNFYSEL 360
  361 NKSIGAAARI WEIIDREPII PMKGGLVPIA PPEGHIQFND IQFSYPARDD VRIFENFKLE 420
  421 ISPGKMVAVV GPSGSGKSTL AALLLRLYDP AKGQVLLDGQ DIKEIDPSWL RRHVGTVSQE 480
  481 PVLFSCSIRD NILYGADDPS KVTEDELVQV AKEANVYEFV QQLPDGFDTL VGERGVMLSG 540
  541 GQKQRIAIAR ALIKDPKILL LDEATSALDA QSEHLVQEAL ERIMKGRTVL TIAHRLSTIQ 600
  601 NADTIAVLRD GHIVEQGKYQ DLLNIKKGAF RELMKHQTFQ GNIEKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle