YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91081249
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESEAKSGG FLTNIVLEIV QSPVNILLVC LIGILVYKIV KSRQDVPQSR QPEPELPKLK  60
   61 KRDFTVEELK KYDGNQEDGR VLVAVNGNVY DVTKGKRFYG PGGPYAAFGG RDASRGLATF 120
  121 SVSAKTDEYD DLSDLNSMEM DSVREWEAQF KEKYDLVGKL LKPGEQPTNY SDDEEDETPT 180
  181 GAGDKSKDD

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.67
Transmembrane Helix	19	40	0.74
Cytoplasmic	41	189	0.50