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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91080399
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVEASISRF YQKPGCTTAK KAELLLKLQQ KNEKLADLET ELCYHVETTA PLSPNDKTLI  60
   61 KWLLRDPFQP GNLSETTHLS EGGSSVIVEV GPRFNFSTSN STNAVSISRN LGLSHVVRME 120
  121 VSRRYKLVFH GAVSKVDEIA SALYDRMTEC RYTPENIPKK SFNEKLVKKE DIREIDVMKK 180
  181 GEVAVKEIND ELGLAFDDAD FKYYTNLFKN VLKRNPTNVE LFDLAQSNSE HSRHWFFKGK 240
  241 MVIDGVEHKE SLIDMIVDTQ NHTNPNNVIK FSDNSSAMKG YVHRSLRPVT SGTTSELRET 300
  301 NAESHLIFTA ETHNFPTGVA PFSGATTGTG GRIRDVQSVG RGGYCIAGTA GYSVGNLNIP 360
  361 GYNLPWEDSK FEYPNNFAPP LEILVEASNG ASDYGNKFGE PLICGFVRSF GMVDAAGERK 420
  421 EWIKPIMFSG GIGTMEANMT EKFPPKKGHQ IIKIGGPVYR IGVGGGSASS VEVQGDNKAE 480
  481 LDFNAVQRGD AEMEQKLNRV VRACLELGKD NPIVSIHDQG AGGNGNVLKE LVEPVGGIIY 540
  541 ANKFELGDPT INVLELWGAE YQENNALLCE KENLELLKNI CKRERCPINI VGEVTGTGRV 600
  601 VLAMDESQKV VPFNLELTHV LGKMPQKVFK LERKTPLLKE LTLPDALSIY STLERVLRLP 660
  661 SVSSKRYLTN KVDRCVTGLI AQQQCVGPLH TPLADVAVTA ISHFGYEGIA SSIGEQPIKG 720
  721 LVNTAAGARM TVAEALSNLV FALISDIRDV KCSGNWMWAA KLPGEGAALY DACKAMCDIM 780
  781 SGLGIAIDGG KDSLSMAARV GRDTVKAPGT LVVSTYAPCP DVRKVVTPDL KAPATGKVGH 840
  841 LLFVDLSHGY NRLGGTAVAQ VFGQLGKESP DVHNVEELKN AFIATQKLIR DGAIQAGHDV 900
  901 SDGGLIVCLL EMCFAGICGM EVQIGHKQGK TIPILFNEEV GWVLEVLEAD LNHCMDVFQK 960
  961 HKVPVYKIGK SIGCGVDSKI TISVNNACIE STVLPLMRMW EETSYRLELQ QTIKSCADSE1020
 1021 YNSLTSRKHP EYRFDPDAKS EIKKPAVVKV AVLREEGTNG DREMAAALVR AGFKVWDVTM1080
 1081 QDLLSGKVNL GEFRGIIFPG GFSYADVLGS AKGWAGSILF NKTVKEQFDK FYARPDTFSL1140
 1141 GVCNGCQLMA MIGWVGELSA DNSPNIVLEH NISERFECRW NTIRIEKSPA IMLKDMHDSV1200
 1201 FGVWSAHGEG RFTFKNSSIY DDLVKNNCVG LRFTDDEGNP TETYPMNPNG SIAGTAGICS1260
 1261 KDGRHLAMMP HPERCDQPYL WPYMPPSWQH FQKSPWEKMF RNAYECHQLT VVVNGCSKMN1320
 1321 CLLVLLLLCH YFVENGTAEH EKYRRTIHGY EDPPSNGKKT FIIERNFETG GHNVEKRSIV1380
 1381 STDDSKIIQK INYLNDTHKQ LMVHWVGEGS NVIICLARHS SLETLAGDVK VGPSAVYISY1440
 1441 DYGDTYVNKT DLFKLSDGSY ATLEKFYNHP KYNTHFVFAD VNHKVLYVTA NHGRDIKRID1500
 1501 LDFTPSDVSF HELQPSVFVV LDKVDHLHKL WVTEDFGNSF RATQDFVKAT YWIKENDLRH1560
 1561 TLLIQRMEPS GYNAILSSSD LFSNRTVMVQ ATGIKEFFVK GDYLFTTKLS SKGVLELYVS1620
 1621 YKLGKKIKCV FDTTLEIRSY FIVDVTSNRA LVAVSHADTV SHLYVSENLD NSEGVVKFTL1680
 1681 SLEDVLCYFP NSTWHDTWIH HVSEEAFADV YKVEGLSGIY IASRVLTKPQ GNNLGPQHLG1740
 1741 SVITFDHGRS WRLIQAPFRD VEGQPTSCSV QQNCSLHLSQ KFSQLYPDTR SISILSSKSA1800
 1801 PGLLIATGVL GKSLKGHYGV YISSDAGQTW RQTLRDLYFF NMGDHGGILT AVKYFKLRGE1860
 1861 TRHVLYSTDE GETWKQAAFH DQNIRLYGLM TEPGENTTVF TMFGSLPEEH QWIIIKLDLI1920
 1921 KAFAYNCSKD DYKPWSPSQS DENRSYIPCV LGQQVTYHRR MPHANCYNGE DFDVPISMTP1980
 1981 CGCDIYDYEC DFGFIRSEKP GNCVRNTSIT SDPYRIPATC KPGKFYKRTK GYRKIQGDVC2040
 2041 VDGFENHYMP EEIPCPFNEV DDFLLFAQRE RISRFNLVTR KLEELPVKNL KNVIAIDFDM2100
 2101 RNNCVYWADI ALDTIGRQCL NDSEPEILVS SDLASIEGMA LDWISNTLYF VDGIRSKIEL2160
 2161 IRTDVNHSGR MRRTVLKGDV LKKPRGIALH PKAGYMFWTD WSVERPSVNR ADLDGSNVVK2220
 2221 LFGKPRVEWP NGITIDYIAE RIYWVDARQD YIASSDLHGD FLKIIISQND VVSHPFAVAV2280
 2281 FKNTMYWDDW KRNAIFSADK DTYHGVEILQ KQLPGLMDLK VYAHGLQVGT NACTASKCSY2340
 2341 ICVSKPKKNS SCLCPDGMEY NNGRCLCPGH VPPLANFTCP PVQNTCSSNH FTCRNGLCVP2400
 2401 KGWKCDGEDD CGDSSDEAHC GMQSCPPNYF VCGDGKCLPQ YWKCDYDYDC SDGSDEVDCP2460
 2461 KQNCTDGQFT CKNGRCIAEK WKCDGENDCR DGSDELNCEP VEPHVCKSEE FQCKVGGVKC2520
 2521 IPSTWQCDGE KDCRDGSDEM NCKNNTCLDI QFSCGEPNNR CIYKTWVCDG DKDCPNGSDE2580
 2581 VNCTTPAIPD TSDATDQFIP KNGTCQDWMF RCQNQRCIPY WWKCDQADDC GDGSDELGCF2640
 2641 PSHAPTPKST TTPPVTTCGN NQFECMGGTC IFSSWVCDGM EDCVGGEDER HCEGVRNCTK2700
 2701 DEFKCHVDGS CIPLAAVCNR QPDCPDLTDE SLCDHNLPNG PATPSCSKGY FPCDGGSCYP2760
 2761 LAALCDGRVD CRDGYDELNC TKTSRVYQVL RMGVDERSIN ETSLLLYWWI TDPPVGKLEF2820
 2821 LPSISKVGEN VWENKTWMKD MEYKFTNLQP ATQYNMTIYV RVQNTSKVFL PAKYFVAFTA2880
 2881 ESIPSEPWNV TAVQTNGSHV LLSWNKPTHP NGQIVNYEIC WYPPNPPIKL KLNGNETAHL2940
 2941 LSAYFEPDKY YNFYVIAHNH KYESKRSKVT TLKFDGDAKL HAVENLRVDK KSETSVTLSW3000
 3001 KYNKTVEGFA VAIIPPNDYP RMLPRVTNTQ SITVDKLAPG TRYTFKVNAY KNAFTGPEVD3060
 3061 IIVVTDGVML PEVPSLQGKL VKEVGTSVKL SWGVPKDSRK VKWTYGVYYG IDADQLYEKS3120
 3121 RFETTDLTTT INDLKACEYY TFMVGVVGPY GQGPLSKSLQ ISTFTNKKAP PTNLNVKEVE3180
 3181 HNPLKMMITW VPSCPTIAEP IGHMIRVYER TTGKISSYGK PPGNYSHVLN VKYGAIYDIS3240
 3241 VATREVDAIY TPNVTYYAPP ILPPHEVKTT IEQNGSFVVD WQEADVPKAV GPFKYEVLVS3300
 3301 EGNTLDEATA RRFRVDKPPF IYTNSSSNMY TFAVQIVADS GYKSITSEKL SATVLELPTT3360
 3361 MGGTNLWLIL VLTILSIVVV NSFTRFANSH YDTRSGAATF DDNGLEEEES PQITGFSDDE3420
 3421 PLVIA

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