YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91079648
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.65
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLVILTSVI GIALSARLDT TYLPPRGGGG GGGGGAFGRP GFGGGGGGAP FGGGGGGAPF  60
   61 GGGGGGGGGG FGGGGGAQIP ILKYVNDNDG SGNYYYAYET GNGIQAEERG HLKNAGSANK 120
  121 AESAEGSFSY TGPDGQRYSI QYVADENGFR PVGAHLPTPP PIPEAILRSL EQNRAEEARG 180
  181 GGGFGGGGGG GGDDGQYRPG AGGFGGDQVL LPQLTHEFFW SLVVKNVTLD ESKFAQKPTF 240
  241 YIIHMQNQQS TLTKPRQVAS DVINKLWKYH IVNGVVLLPD HLNPTVFNAF SWFPYHGGTC 300
  301 AKVVNWYPQK IPNKFNHCTI KVRMVQWPPF IINIPNNSWS GTQTSTRGIE ISILDLVAEL 360
  361 ANLRMFYQHD QVPENWGDVY DNGTITGNLN YLYHEINDMA IGDYAKTMKR TRFFDDVSYY 420
  421 HHQGLVFCVP SKSVNSKLTS LSEIMGLGPL VLTMLLYLVV TTMSWLVSGQ DHTHYQKFYT 480
  481 CAIATYQILL GLPIYQQPRS TKVRFFIGLL ITYSFYMVTA YQTLLTSALA SASTRQEIST 540
  541 IDDILAHGFD IYGLSSRYFT SDGSGSTMSR DESWKEMVQE AIGEDEELQR ELVAQVSTYG 600
  601 AVAEALWWAH FYNVDKQHWP YNVRMLEENP DEERLHQRNI LPEEESWGYD EVQNTEPVEY 660
  661 HKFPLPFSSI HLIDSEESFE RFLDGGLQDV EVVGIDCEWK PNFGFGFTSD ILMIKHSLPE 720
  721 LNFTPKQVGF LDLLSLWKLL EKYPKVVLPY EVQGSGPSLG TLVNQCLGRP LDKSDQFSNW 780
  781 EKRPLRNSQL VYAALDAYCL IEVYDVIKGC CEKAEFPFDE TCYNLMTNEK APKKKAKKPV 840
  841 QKKPKPLQAD EEIAQPPSPH SSQVPAASIK VVCDTMLQGL GKNLRRCGID TAILENYMDH 900
  901 MECVRYAQDE QRYILTKGNV FNKLYGYVPL GHCLRVNSDN VDEQLKEFVD YYKVNVTVND 960
  961 VFSVCQRHFN QHCVREISPR RKNGRGLSYS TVDKNGQNCD YFKEVQLFD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle