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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91079881
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLDSDCIKE IVASATDSES GLLYLFANMQ NPESEKSVII AVNNLLANGK TRLKGLQLLK  60
   61 DLLLYCSHEV FVENALQWAS YCMVQHVEDG SKEIKLNTLA KIIENSNDIE TFNKKFATEY 120
  121 LSTTLKACLV THNNDEKLSC LKCLAQCMKR FPTWFGNHKQ KVEAFLIENL DNSCEELTKW 180
  181 AATAFVYFLE EIVSTLVGIV SNLQINKVVL PYSDPKCQVK LYEVLIAIFS QENVHSLSSL 240
  241 HSFVIIFTNG ARSSNHRISQ MSREGLDLLE KISQPVCASL YVCEAKSSQQ ITYFDSLGSE 300
  301 MDVAIDKDDN VTSEVSQENQ AEENGTEEKK IHIISDIVIP PQPEFAKANE EIVFVDEMEM 360
  361 EVVESNGVDE NLAEVRSSVS SSCDIVMEEN TKKFSIEVKD DNEDDLEDMF RCTEAFDSHL 420
  421 RGPSFIMEPP PKLEFSNSSG GWLDCSASGN PQPSIDWLSV DGTSVGDVAG IRKVLRNGTL 480
  481 FLQPFPAAAY RQDIHSTVYR CVASNSVGRI ISRDVQIRAV VAQTFRVEVE VTGAARGCTA 540
  541 VLKCIIPPFV KDLVRIISWI QEPTFFIYPS LQGDGKFHQL PSGELLIHNL EFSDQFPTYR 600
  601 CRTMHRLSRQ VIVSSPANVR IIENRGIVSP VMLENSGTVT VAQDEGAALI CIAHACPPPE 660
  661 YRWYALSGVE SNLMVSGISI KILLLFFPQS FYGQESGIYR CTASNAGGEA SADVRLVVAT 720
  721 ALHVEISPPM LTVHMGGTAE FRCMVSSSND GPHLLTWYKD GRQLPSTGRG SSETLVINNV 780
  781 GREDRGMYQC IVRRSEGDTS QASAELQLGD APPILLYSFI EQTLQPGPAV SLKCSASGNP 840
  841 TPQITWTLDG FPLPSHGRFV IGQYVTVHGD VISHVNISHV MVEDGGEYTC TAENRAGKSS 900
  901 HSARLNVYGM PYIRLIPKVT AVAGETLQLK CPVAGYPIEE IHWERSGREL PDDLRQKVLK 960
  961 DGTLIIHPVE KKADSGVYTC WARNKQGHSA RRSGEVSVIV PPIIEPFSFQ DGLSEGMRTR1020
 1021 TVCGVSSGDP PLVVSWLKDG QALTPALGVN VSALDPYSSL LSISSLDSRH SGDFTCVASN1080
 1081 PAAEVRYTAK LQVKVPPRWE VEPVDVSVER NHQVSIHCQA KGVPTPIVTW KKAIAGKSGD1140
 1141 YEEVKDHTHT RLLGNGTLIL QHVKEDREGY YLCQAENGIG PVIGKVIQLR VNSPPYFAAP1200
 1201 SRLVTVRKGD TAFLKCDVNG DKPISVIWLR GSKNELNPSS NYRASVKQDV TPDGVVAELQ1260
 1261 IINTQSSDSG TYFCQASNMY GKEQQLVQLL VQEPPSNPKE LEATMISSRS VALKWQHKSG1320
 1321 NTDEVFKFIV EVRESDGVWK QVDLGEVPTT FTALVENLSP ATKYSFRVFA VGSAGKSPPS1380
 1381 PELEIRTEPQ RPAGAPLNLA VRALSSTELI VTWTPPSAEL RHGDIQGFNV GYRTTSMSAY1440
 1441 NFTTVMGDGE DGGELLLGGL EKYARYSIVV QAFNEVGTGP LSDSVSTQTM EDVPDMPPED1500
 1501 VRCAALTSQS LQVSWQPPPT EHCNGLLQGY KLTYEPVLDD NWRGNDEMET RKTTALTTVI1560
 1561 TGLKKFTNYS LQVLAFTKVG DGVLAPPTYC QTEEDVPGSP ADIKVAVSSA QSLKLSWLPP1620
 1621 LEPNGIITKY NLYKRSLDGR QEVDNAKQTI SSQHTSYEIK GIQAHIEYQF WVTASTRIGE1680
 1681 GQSSKVVSQV ATSRVPARII SFGGTVIRPY KTSVSFQCES VGNPKREWLR GEKILKGGAN1740
 1741 ANQQLLDTGE LILANLQLID SGNYTCQVDN NQGSDKITYH LVVQVPPSAP LLYVSSATSS1800
 1801 SILLNWKIGN DGGAPVSGFT LNYRKEHGDL DEVHLSRHAI SYELRGLSCG TTYHLYLTAH1860
 1861 NIVGSSPASH SLQARTQGHP PGVPPASSFI TPNSTSVLLR LHVWPDNGCP ILYFILQYRK1920
 1921 ASSSQWILVS NALKPQKRTS ITGLTPATKY VVKLEAHNIA GFATEEFVFM TLTKDGGAPP1980
 1981 LNLLKQGHNE TSIYSDIRFI IPLLVLIIAV IISILGAILC LKHRQSEIAK ELLDNQHNAE2040
 2041 AQRERYYATI HKAALAAGEK IPETSEDISP YATFQLSEPS TLPQNTMLHS FMYHEHPMTE2100
 2101 GCASPPPSSS VLRSSPYYNI IQGIAWTTLS VLCICCYTGS IQLDKNASSA EYYRVIYVIF2160
 2161 LHEPNKTTNS ELLIQPKEFL IFMCFYAAFS AIWLCISGAV IWAMIHNKWQ LTKCLFGGWS2220
 2221 TTAFIISLVD IILTSLLGRD YARIENTSDL LTLVCYGIVM SLACRGYVLW VVNVVFAVVF2280
 2281 LKFTIKIVLK ENQGSAMPII HGYESNK

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