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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91079186
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRYIPFAFF LISVLQVCFA PPVTQNKDKD KEKGEDEIGG LEDYMEYHRY LQEVVNALES  60
   61 DPQFRQKLEK ADETDIRSGK IAEELEFVSH HVRSRLDEIK RVELVRLKEL TEKKRQLQQN 120
  121 IDLEDPSHHH LDHSNPHTFE IDDLKKLIAK TTADLAEADK KRREEFKQYE LQKEFEKQEK 180
  181 LNHTNGEDRE KLEREFRERE EKHKKHEKLH EPGHKAQLEE VWKEQDQMQQ EFDPKTFFML 240
  241 HDIDGNGLWD QDEVKALFIK ELQKMYAAGE PEDDMRERAE EMERMRESVF SEVDVNRDGF 300
  301 IDYEEFLAQT KRNDFQQDHG WQGLDERKPY TDEELEEYIR RHQAANQIPH GYPPQGYAQH 360
  361 PPPGYHPNVA VHPNGVPVQQ YHPGQVPQQQ FHPGQLSQQH PQQLQGHLPD LNTNEVYPQQ 420
  421 RQQQYQQPPQ HYQQQQYQQM NYQQHPQQVN YQQQHPQVPV QNQQQQHPQV PVQQNQQQHP 480
  481 QAVNQQQVPV QNQQQAANQQ VPVQNQQIPV QNQQQQIPVQ NQPQGVPQVQ GNVQQGGGCQ 540
  541 WRLPQDEWTD EMRWCCSAIS HHSGPGGPQW AAPAPHPACP AKSGPDLSVP YASRRVCPPT 600
  601 DAAAADLHLL ERRRRPRMPD LLDSNRAVFD ALSGSRNRSE DEDHSISFKE SFKCDDGAVW 660
  661 LELLQIMTMW QSGMGGPGGK NNAWMKLMGI VHKERRHHDS GATSTDRTLS QSLPKLSSQE 720
  721 EDGHTPHSQF TGVAHFEPIP HDHDFCERVV INVSGLRFET QLRTLNQFPD TLLGDPARRI 780
  781 RYFDPLRNEY FFDRNRPSFD AILYYYQSGG RLRRPVNVPL DVFSEEIKFY ELGELAINKF 840
  841 REDEGFIKEE EKPLPSHEFQ RNVWLLFEYP ESSQAARVVA IISVFVILLS IVIFCLETLP 900
  901 EFKHYKVFNT TTNGTKIEED EVPDITDPFF LIETICIIWF TFELSVRFLA CPNKLHFFRD 960
  961 VMNFIDIIAI IPYFITLATV VAEEEDTLNL PRAPVSPQDK STNQAMSLAI LRVIRLVRVF1020
 1021 RIFKLSRHSK GLQILGRTLK ASMRELGLLI FFLFIGVVLF SSAVYFAEAG SENSFFKSIP1080
 1081 DAFWWAVVTM TTVGYGDMTP VGVWGKIVGS LCAIAGVLTI ALPVPVIVSN FNYFYHRETD1140
 1141 QEEMQSQNFN HVTSCPYLPG TLGQHMKKSS LSESSSDLVE LEEGLLVTRD QLVRKQNCNP1200
 1201 RHNNNINAMS IETDV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle