YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119387888, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSYACLLVL SALIYSVLGQ ENFKCPDDFG FYPHHTSCDK YWKCDNNVAE LKTCGNGLAF  60
   61 DASDPKFLTE NCDYIHNVDC GDRTQLEPPI SSPHCERLYG IFADESKCDV FWNCWNGEAS 120
  121 RYQCSPGLAY DREARVCMWA DQVPECKNEE VAGGFTCPAP GEVSNSGSFS RHAHPDDCRK 180
  181 YYICLEGTAR EYGCPIGTVF KIGDADGTGN CEDPEDVPGC EDYYGDLDLK SIRKSELLAG 240
  241 LQSSGSSRSH QPATKSKPRP APASRNAPEP ADNN

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	274	0.99