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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|221222659, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPSAAETLR AWLLSALVVH GAVAGNPDAK RLYDDLLSNY NKLVRPVVNT SDVLRVCIKL  60
   61 KLSQLIDVNL KNQIMTTNLW VEQSWYDYKL RWEPKEYGGV HMLHVPSDHI WRPDIVLYNN 120
  121 ADGNFEVTLA TKATIYHQGL VEWKPPAIYK SSCEIDVEYF PFDEQTCVLK FGSWTYDGFK 180
  181 VDLRHMDEKA GSNVVDVGVD LSEFYMSVEW DILEVPAVRN EKFYTCCDEP YLDITFNITM 240
  241 RRKTLFYTVN IIIPCMGISF LTVLTFYLPS DSGEKVTLSI SILISLHVFF LLVVEIIPPT 300
  301 SLVVPLLGKY LIFAMILVSI SICVTVVVLN VHFRSPQTHK MSPWVKRVFI HILPRLLVMK 360
  361 RPQYVFETNS RFLMRGREPS TCLYPYHTTV QRDDCSPKRR YPTRTPSKED LSPSLEDGGP 420
  421 FGGSCQIHGP VAIPHSESED LTVSAEADNG IKSPVLRNPG FSHSRCPPEI HKSCFCVRFI 480
  481 AEHTKMLEDS TKVKEDWKYV AMVLDRLFLW IFTLAVLVGT AGIILQAPTL YDDRIPIDKK 540
  541 FEEYTTTTVV RCPPPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle