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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91077114
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTFLAKAYC QEGGGYLRRA NPQHLHDIFN KYASQEKNGE RFMTPEDFII KYLGLFEPEN  60
   61 FNAHSVRLLA GIVDTSKDGL ISYSEFQAFE GLLCFPDALY KTAFQLFDTN GNGMVSFQEF 120
  121 VEVMKKTELH ERIPFNMDSP FIQLYFGRDK KRLVPYSEFS QFLHDFHEEY AIEGFRRADK 180
  181 TGSGFISVLD FQFIMTNIKS HLLTKQVQSH LIETAQGATS GRRVSFPYFI AFNSLLNNME 240
  241 LAKRIYLNVT NGHRTQEVTK EEFMHSAQAM SQMTPLEVDI LFQLCDVLHQ TGRIVYNDLN 300
  301 AIAPEQYYKQ ITNRLAEIHA VSSPEDRGVF IQVLESMYRF TLGSVAGAVG ATAVYPIDLV 360
  361 KTRMQNQRTG SFIGELMYRN SIDCFKKVIR HEGVFGLYRG LVPQLMGVAP EKAIKLTVND 420
  421 FVRDKFYDKN GNISGIGEVI SGAAAGASQV IFTNPLEIVK IRLQVAGEIA GGSKVRAWHV 480
  481 VKELGLFGLY KGAKACLLRD IPFSAIYFPT YAHTKAKFAD ETGYNHPLSL LAAGAIAGVP 540
  541 AAGLVTPADV IKTRLQVVAR AGQTTYNGVF DAARKIYVEE GFRAFWKGAI ARVCRSSPQF 600
  601 GVTLVTYEVL QRMLYIDFGG TRPAGSELKV TALGGDAPKL QKPDHVGGYS VSIPVFSGIE 660
  661 TKFGLCLPKM SASQPRLIGL VVLLLSIVSR DKFITTSNKT ENIWKKAGRV TGLLLQNCMQ 720
  721 HDGPQEQFLL ILQRCLKRRS LLALDRSLKA DVIELASGIE LVKYRQENDT TQLRQFSDWK 780
  781 HEMLKRLTQL LDTHVLKIRL NGQFIEARGK KKQNMFMSLL MFGIAAVGLI MVPMGFQFLA 840
  841 VLGGKALLLA KMALILTAIQ GLKKIATSNL NYGLYAAPPE HHHGHCKDGF CDEFKSLEAD 900
  901 DSVFVEVDVD QLASNFGFWH YDRQWPYEAE SSDVAPSYSH YYKVPDQHPN LLHALQPRED 960
  961 SIRNIM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle