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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91075994
Protein type: Transmembrane
Type Confidence: 0.52
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILNIWYLFA FATCTKALIS NPHTSSNQTE DNAPYFTKRN LPVLVSGRQG QSSILKCGAK  60
   61 GTPKPQISWY KGTNLITQSN KKYHLIHQNL KILNLQSEDN GLYKCLVCNE VSCIHHNYNL 120
  121 VVELCGSNAI YSKKSAVVSG SNVTLACRAG AAWVRTYPNG TNQVIKNNTR CLNIDNISQE 180
  181 DEGWYRCQRV SWYLTVIDSE EEENTVPASS LRKKRETEKK APYWVNPKKM SKMQVKPAGN 240
  241 MVNLKCKAGG NPTPNITWYK DDKPPNRQLG DIRYQHWSLT LEDLVTGDTG DYTCVVCNEL 300
  301 GCINFTYRVD VIERFPSKPY IKDGYPQNLT VLVNTNATFE CPQMIADLEP FIQWVRYNES 360
  361 ENYENFTNYN KSKSGDTDSP EVYEIKNVTY QDEGWYVCIA ANSLGQTASK GYLKVVDKVE 420
  421 PKNNYIVYTA LIIFFTIIAF GTLVLLFFRK LKIEKQKKMI DIETVRAAVV TQWTKKVIIE 480
  481 KIQNTNEDVS EPLLMPVVKI EKQKSQNNNS GDGMISEYEL PMDSDWEIPR SMLCLGKSLG 540
  541 EGAFGKVVKA EAVGLLKPGA SSIVAVKMLK EGHTDNEMMD LVSEMEMMKM IGKHNNIINL 600
  601 LGCCTQGGPL YVVVEYAPYG NLRDFLRQHR PSSGYEPAIG LEEKEKKTLT QKDLVSFAYQ 660
  661 VARGMEYLAS RRCIHRDLAA RNVLVSDDYF LKIADFGLAR DIHCNDYYRK TTDGRLPVKW 720
  721 MAPEALFHRV YTTQSDVWSY GILLWEIMTL GGTPYPSVPS VEKLFQLLRN GHRMEKPPCC 780
  781 SLEIYMLMRE CWSYKPNERP TFSQLVEDLD RILTITANEE YLDLGLPQLD TPPSSQESSG 840
  841 DEEDFPFDSL TSQCLNNVQL S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle