YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89896924, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLMAIVIG ILFTIGTYLI LSKTLLRIIL GTSIIGHGVN LLILTMGGLK KGGPPLLGLK  60
   61 ESLFTDPLPQ ALLLTAIVIN FATTALFLVL SYRTYKVLGT DNLEELRGCD DE

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.76
Transmembrane Helix	4	22	0.81
Cytoplasmic	23	27	0.67
Transmembrane Helix	28	49	0.85
Non-Cytoplasmic	50	70	0.83
Transmembrane Helix	71	90	0.95
Cytoplasmic	91	112	0.87