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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89896716, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTEAKKQVF ICAGTGCISS GANTIIDLMN VEIERQGLAK DVELIATGCR GFCEQGPTLV  60
   61 IEPAQRFYRR IQPEDIPELV EKELAQGEKV ERLFYVDPQS GEPALSYEDI SFFAKQTRIA 120
  121 LKNCGFIDPT KLDDYLAHKG YEGLKKALTM APEAIVEEVK ESGLRGRGGA GFSTGLKWSL 180
  181 CRATPSDKKY VICNADEGDP GAFMDRGLLE GDPHAIIEGM LIGAYAIGAD EGYVYCRAEY 240
  241 PLAIKNLQIA IKQAEEAGFL GNNILGSGFN FHLKINAGAG AFVCGEETAL MASIEGKRGM 300
  301 PRVRPPFPAQ SGLWGKPTNI NNVETWSNIP HILRNGAQWY AQYGTEKSKG TKIFALTGKV 360
  361 NNTGLVEVPM GMPLRDIIFD IGGGIKDGKK FKAVQIGGPS GGCLPEDMLD LPVDYDTLTK 420
  421 AGAMVGSGGL VIMDETTCMV DIARFFLNFS QSESCGKCTP CREGNKRMWE ILDRITRGEG 480
  481 REDDIEKLET LAYTVKETSL CGLGQNAPNP ILATLKYFRE EFEEHIHAKK CRAGVCSELL 540
  541 TYSIDAEKCK KCGLCARNCP ANCISGNKNT PYVIDGERCI RCGSCMDSCK FGAVIRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle