YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89335227, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKRIEEPE KDNSERWLLT YSDLITLLMI FFVVMYSMSK VDAEKFQSIA ESLSVALGGG  60
   61 TRVEIGASPS GPSLIETYPT NKPQEGKEPE DGEGNGDGTG ADMENMTIET IKQKLDKFAA 120
  121 DNGIETKLVS SIEERGLVIS IQDTLLFESG AAVITPKARE ILDKINNVLA SAPNYIKVEG 180
  181 HTDNLPINTN RFPSNWELSV LRATNVVHIM QEIIPAEQLS ATGYGEYRPL AANDTEAGRA 240
  241 RNRRVDLVIL RSKYDLTEPG QSLEADPTSG TSALR

Type	Start	End	Confidence
Cytoplasmic	1	16	0.96
Transmembrane Helix	17	38	0.91
Non-Cytoplasmic	39	275	0.97