YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MURG_DESHY
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVIVTGGGT GGHIYPALAI AKGILAQRPD AEILYIGTRE GMEARLVPEA GIEFSGVSGQ  60
   61 GLPRKLSLET LKVGGKSFKA LWETKQILKK FKPDLVVGTG GYVAGPVVLT AALFGIPTLL 120
  121 HEQNALPGIT NKILTRFVRK VMVTFPESIA HFGVQKKLVL TGLPVRAEIG NISREKGAED 180
  181 LGLRSDCLTL LVTGGSRGAR SINQAMPTVL KHLAGRKDIQ VIWATGKATY QETLENLKAQ 240
  241 GIQWQRENWR VLEYLKDMPE ALACADLFVG RAGATTLAEI MVAGKPGILI PYPLAAENHQ 300
  301 EFNARALEKD GAACVILDQD LTGENLWALV QGLLEKPEKL RKMAQAARGL GQPDALNKIV 360
  361 NVCLDTAWK

Type	Start	End	Confidence
Cytoplasmic	1	94	0.69
Transmembrane Helix	95	116	0.66
Non-Cytoplasmic	117	369	0.98