YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89333760, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQKGGSPMK KIMVIGAGQM GGGIAQVAAQ AGYSVILNDL KEEFVTRGLS VIEKNLRRNV  60
   61 EKGKLEAIES AATLGRITQS TALQDAASAD LVIEAAVENM VIKSQLFAQL DEICPEHTIL 120
  121 ATNTSSLPIT EIAAFTKRPD RVIGMHFMNP VPVMKLVEVI RGLATSDEVY KTIETLSQEM 180
  181 GKTPVEVNDA PGFVANRILI PMINEAVYTL YEGIATVEDI DQVMKLGMNH PMGPLALADL 240
  241 IGLDTVLSIS EILHEGLGDK YRPCPLLRKY VKAGWYGRKS GRGFYQY

Type	Start	End	Confidence
Signal Peptide	1	29	0.44
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	287	0.98