YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89333599, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNLLTIAGS DSSGGAGIQA DLKTFSALGV YGMSVITAVT AQNTLGVDEV AEIGRDMVKA  60
   61 QIDAVFKDIP VHGVKIGMVS NPEIITQIAL SLKEWKAPNI VVDPVMISKS GYALLKPEAV 120
  121 ETLKRELLPL ARVVTPNLPE ACCLLGIEAL DEEGMEFAAQ ELHQLGPESV LIKGGHLKDA 180
  181 ANDLLFDGED FSWFKAPHLN QKHTHGTGCT LSSAIAAHLA LGYDLQTTVQ KAKDYLFGAI 240
  241 EQAFPLGHGV GPVHHFYRMT CR

Type	Start	End	Confidence
Signal Peptide	1	20	0.62
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	262	0.98