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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90186653
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGFWFILV VASVLLMLLD CCYGSFVGIC YGRNADDLLP PDKVSQLVQD HKIKYVRIYD  60
   61 SNIQVLKSFA NTGVELMIGI PNLDLLPFSQ FQTNADTWLR NSILPYYPAT KITYITVGAE 120
  121 VTESPENISA LVVPAMTNVL AALKKAGLHK KIKVSSTHSL GVLSRSFPPS AGAFNSKHAH 180
  181 FLKPLLEFLA ENQSPFMIDL YPYYAYRDSP TKVSLDYALF ESSSEVIDPN TGLLYTNMFD 240
  241 AQIDAIYFAL TALNFRTIKV MVTETGWPSK GSPKETAATP DNAQTYNTNL IRHVINETGT 300
  301 PAKPGEELDV YIFSLFNENR KPGLESERNW GIVYPDLTNV YSLDFTGRGP VDMTADANAT 360
  361 SSTSNGTKWC IASSNATQLD LQNAINWACG TSGNVDCTAI QPSQPCFEPD NLVSHASYAF 420
  421 NSYYQQNGAS DVACSFGGTG VLVDKDPTYD NCIYMKTGTN QTLASNNTTA TSISSPPSSS 480
  481 SKGVYSSIST SALLLIFLLF LLDIGQA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle