YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|162460268, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKRTAFAAD DAIIAAAAAV TSQPGRRFTS YPPARARGGC RLAPAAAARQ ATDDPGAAGS  60
   61 WPELVVPRHA DFDDWMEKHP SALAAFESVL AAAKGKKIVM FLDYDGTLSP IVRDPDSAVM 120
  121 SEEMRDAVRG VAEHFPTAIV SGRCRDKVFN FVKLAELYYA GSHGMDIKGP TAQSKHTKAK 180
  181 AGAVLCQPAR AFLPVIEEVY RALTASTAPI PGATVENNKF CLSVHFRCVQ EEKWRALEEQ 240
  241 VRSVLKEYPD LRLTKGRKVL EIRPSIKWDK GNALQFLLES LGFAGSNSVF PIYIGDDSTD 300
  301 EDAFKVLRNL GQGIGILVSK IPKETRASYS LREPSEVEEF LRKLVSWSKE SRQRD

Type	Start	End	Confidence
Signal Peptide	1	22	0.69
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	355	0.99