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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: sgca-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVINLVEDS LYQGNTQQVF ELPINGLDVE DLVSNRDRKI SQLENSLRNT FRGRNVNPYI  60
   61 AGVRSRYIIP RGKEHIFKNS FGTMVYVGTQ QKFYPGTMSI VHNLQTMPEF CSNPSSVVMN 120
  121 KYFAPTFPVD WCNVAVRNIS SLEGEGIDEL IKDEQEEKLT KANPDQNLNE KPEQPPRELY 180
  181 GYSEHGFSIV LFAIILGVSI LFVFALVLIF FGSREGQKWR DDKTSGETLG EFISIRDNQK 240
  241 KLRELSLQRQ LLSMGPDTNS TAPSGIHSYL QSRSRAPSTS IARFSKSASR LNDKEDTIEL 300
  301 LPSVDHVPVG KQTVAEAAKQ CGSSLHLYRN PLSNESDEQD TESSDEDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle