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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: itx-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWQLLVPLAV LLTVSGQSTD EISHERIFLK YPSSFVNFTS DNWKLTETDN QLIIAVKFQA  60
   61 SSHIGQIFSV RFINPDGSLK ALLTAGIAAG ILQINLYDDK NTKILNKPME NSPINVHEHS 120
  121 LAVGLNTTAR NLWYKLGADN DLNCEINQAI DISNTEVTVT IGGGSQSMIG CVSIVAVSAG 180
  181 ESSPVSQGTP IAYQDIDECP KADACTTKDC NTGRCIQLEV PTCDCYGTEM AGPNCRLPAP 240
  241 TIQLRNNDEN EESSAYLRYK PWEMDSHFSR LSMDFRFSDS DAKEGILVYG ETSQGKIFKI 300
  301 YVVGTKGKVM LDTTNVADFE LREDHSISTE KKVSPFRFHS IIVKIVDGIF NMLVDDNVHR 360
  361 RAFNESDALV FDTIQFGAPI PTDVSEVGVT ACVKNVYVDH VDIIELAVLT NDSRTTASRV 420
  421 RSCNNEDLTE FQGPSLFSAD PLAEILVEDP SDIKSEFGES VIGADMFPVP SNKKPKTQPL 480
  481 SSCEKANAYM CQNGAGCKKE SETEFTCFCK EGYIGKFCQF TTIPRSCAEA YDFLKLPNGA 540
  541 TWVDVDGNRK LDPSVTMCTD GQTEIPHDMK PGYVVRDTTY QNHSLFVLSY RDFNSWQLAK 600
  601 YIKNSGSCSQ TVNYRCNKAP LRFKEGKTWF KSVSNATEKI KQIGMLPNSC PCLDRGCQSG 660
  661 EKCNCDSGAI SEDIGELTGR YSGICEVVTL FDEADVRAEM TISELKCSGY ENEKPIRFTE 720
  721 RTELKISDWT GESIDLQFRT TETPASLVTV QGNYGEKIIS VSLTDGHTVQ ISNFEALKII 780
  781 ESQTKLNDSN WHHVLIELAD GEIRVTVDAT HVLMTIGDNA VLEGSVVLGG EGDGLIGCVR 840
  841 NVLINDEPVN LQEIVKTSEK TGITETCDTR CTADFCQNGA KCYEDFVSGM PFCQCAFPDV 900
  901 HSGVNCEIDI NTNSSVSFHG GYLKFDDVKN VLNAPIYFSF RTDRTHALLF FAHDQNNNFL 960
  961 QVHLSEEVNV TLTLNNLDIV SQCTVRAQPG TEYGDMRWIQ VAITHDSKSS QLQVDDAACT1020
 1021 IRTSRVLSEI PITRLLDVYN SELVGMPVGL AAPVKPNPYT FTFIGNVNTG EKTNGKRLLF1080
 1081 SDCLPRRRSP SIFLMLIFPD GSFILAPKYE SPIPRFYGCI RGFQINREMI DMREKTEHLA1140
 1141 TSEMYEAYGP ALVKVGCEVG CSSITCLNGG HCSVAWANTD PSAATTTCDC SRTSYTGASC1200
 1201 SLDEGVHMER SGFIEFDISK EMARYVFIEQ NSKIPQLLKF AFSSSPEIVL KDKSMLALVV1260
 1261 FREKQKLEIE INPNRTINVA ITYENGKSDV LNFVGDFLDG YRHFVVVQTN QASATAVMID1320
 1321 SLRQDFEYRG KDKNIDLFNA ERIRIGGGPR DRYTETDGYL KAGYTGCISN FIVDYQRGSS1380
 1381 LTYKPITYFA NPTHHLSKLI MTNRIVLGGC AAFEVPNSLP VYQNRVKFPV WDTEFRRFVY1440
 1441 FRDVEPLNDN NDTEWTDEDS GSLMWVVFII FVLGVIFLII FCIFMKCCRE KIHARDDEYL1500
 1501 HDEDIPLHMA PTILRHPQPS PPPIKKSAAS NYKIPNPNID FNKENTFDYD DEDEFAGIAD1560
 1561 DNVTDDVTVR NEVDDSDNET IRHIDDEVQD EDGMVIVSRP TQVSHLPQRV SSFRTGDPTA1620
 1621 PKDSPLYSNI RPPTSPIHAS VPVPPPRMSN NSPFA

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