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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66393592, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRILNRTS VLSLGLCSLL LLSAVAAAQS EERERECAFN DQHQQVDEQS VAGDWHITRE  60
   61 NNTILCSKSS RCYGLWEKTH DGEIRLVKQG CWTYIGDQQD CHDDRCVVTT TPSQIQNGTY 120
  121 RFCCCSTNMC NVNFTENWVP SPTSTANRDQ PPIHRDEAIF IALASVSIVA VLIVALFFGY 180
  181 RVMMGECKQG LHNMDMIEAA PSEPSLDLDS LKLLELIGRG RYGSVYKGSL DERPVAVKVF 240
  241 TYANRQNFVN ERSIYRVPLL EHENIARFIV GDERMTTDGR MEYLLVMEYY PHGSLCRYLS 300
  301 LHTLDWVSCC RLAHSLTRGL AYLHTELLRG DIYKPAISHR DLNSRNVLVK NDGTCVISDF 360
  361 GLSMKLTGNR LVRPGEEENA AISEVGTIRY MAPEVLEGAV NLRGCESALK QVDMYAIGLI 420
  421 YWETFMRCTD LFPGETVPEY QMAFQAEAGN HPSFEDMQVL VSREKQRPKF PEAWKENSLA 480
  481 VRSLKETMED CWDQDAEARL TAQCAEERMA ELLLIWERNK PVSPTINPMS TALQNERNLT 540
  541 HSRRAPKMGS YPDYSSSSYI EDHEGMVKNL PGDVSTSGTS SVGGVGVSGS SGGVAATGEK 600
  601 NRNSINYERQ QAQAQARLPS PETSGTSLST TTTTTGLTPS TIMTTISESG HSEDTGAGGS 660
  661 VPVCLQLTEE DLETTKLDPK EVDKNLKESS DENLMEHSQK QFSAPDPLSS GSTSLLYPLI 720
  721 KLAAEVTGGS GSGGQTDFGV GSSGMSDTPT AMFPLPKQQN LPKRPTSLPL NTKNPGRESS 780
  781 SSRLKFGKHK SNLKQVETGV AKMNTVVAVE PHLATVTNNG PSVRSGAGVV VVNGYGVGNG 840
  841 ASSSDAFGNT NPVGPQGEGG APLLQSQLSG EDSRLNININ SSPDEHEPLL RREQPAARDH 900
  901 SGRTNSNNNN SNIHTTATFC ALTAADAQIE ALTCLSGAPD GRDNGVPLRP PKPRRPERPN 960
  961 SLDLSASSQD SSLLGEAVSQ EGKAGSAEKI KKRVKTPYSL KRWRPSTWVV STDTLDGEVN1020
 1021 NNGHSQQTTM AVSGGGHPSA GQSKSSIAVF LVGGGTATAT LTSDPPDMTC L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle