YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MTX1_PIG
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPMELFCW SGGWGLPSVD LDSLAVLTYA RFTGAPLKVH KITNPWRSPS GTLPALRTSQ  60
   61 GEVISVPHKI ITHLRKEKYN ADYDLSARQG ADTLAFMSLL EEKLLPVLIH TFWVDAKNYV 120
  121 EVTRKWYAEA MPFPLNFFLP GRMQRQYMER LQLLCGEHRP EEEEELEKEL YQEARECLTL 180
  181 LSQRLGAQKF FFGDAPASLD AFVFSYLALL QQAKLPSGKL QAHLRGLHNL CAYCTHILSL 240
  241 YFPWEGAEVP RPRQTPASSE TEEEPYRRRN QILSVLAGLA AMAGYALLSG IVSIQRAPPA 300
  301 RAPSTRALGM AEEDEEE

Type	Start	End	Confidence
Non-Cytoplasmic	1	271	0.62
Transmembrane Helix	272	294	0.85
Cytoplasmic	295	317	0.56