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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116875770, gi...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILLLAQRD VGCGGMTLNS VPLRSVSLRP LRDSVGTSLQ RHKRNWVWNQ FFVLEEYTGD  60
   61 EPLYVGKLHS DVDKGEGKVK YVLNGEGATS IFTIDENTGD IHATKRLDRE EQAYYTLRAQ 120
  121 ARDRATNLPV EPESEFVIKV QDINDNEPKF LDGPYNAQVP EMSPVGTSVV EVKATDADDP 180
  181 TYGNSARVVY SILEGQPYFS VEPKTGIVRT ALPNMDREAR DQYLLVIQAK DMVGQMGGLS 240
  241 GTTSVTVTLT DVNDNPPRFS RKSYQFAVPE SLPVASVVAK IKALDSDIGP NAEMDYRIIE 300
  301 GDGLGVFRVT TDKDTQEGVI TLQKNLDFET KSSYTLKIEA SNRNIDPRFL SQGPFSDTAM 360
  361 VRLTVENVDE PPVFSSPLSK MVVSEAAKVG TMIGTVSAMD PDTTNSPIRY SIDRNTDLER 420
  421 FFNIESPTGV ISTAEPLDRE ANAVHNITIL AIESMDPSQV GKGVALITVM DINDNAPVFA 480
  481 IEYETFLCES VGPGQVIETI SAVDKDEPPS GHRFSFSLTA ETAGNMNFTL RDNKDNTASV 540
  541 LTKRSGFQRR DQSMYRLPVL IVDSGTPALS STNTLSIRVC DCDPDGTPQS CGTEAFMLSA 600
  601 GLSTGALIAI LACIITLLVS GAADRDNEEE EEGTSDLDED RDVREDIVRY DDEGGGEEDT 660
  661 EAFDMVALRN LNVVRDSKAR RDVTPEVPTL YCSRPPPYKI TPDNGIFREF IWDRLKDADV 720
  721 DPSAPPYDSL QTYAFEGSGS AAESLSSLDS LSTDSEQNYD YLSDWGPRFR KLADLYGHGD 780
  781 SSNIFSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle