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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89257646
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCDSHGNLT DAEFSKPLPS IGIYVATASL ICGAAMFADL LHAFRHRKYW FPCKYFSLNA  60
   61 TTLTFISVCV KLSLDLNTPM PSRQDQLAKL SSSVFFCVVM ANSMPSLGFM VTRDLLMNLV 120
  121 ALGILVVTDV ANICIQLGTG AIYVFTREHA LVTVLMLLVF MILSFSAIAI PATKRYLELK 180
  181 YKKKYEFALK ECPSYAERRK GVPKLREDLM KFWMMAHTSS PQFVMARSVT CTASGFLCFL 240
  241 SAAALAEAIV RSYFLQPRSV GFCNGESDYK WSTTLVLVSQ GAAIAFGTIA PASRWFSAVN 300
  301 SRCPSKKSLR DELRVESYWF ECLSEKRERP LSLWMLHGRR SRKLAHDVSR WMLDVCIATQ 360
  361 RGLVLASKFL RFVTVYFVSR ISLCCLLFTS KFESTVSNSE SSSSLSTRRF VLHLEGEEEL 420
  421 VDYMARSNRE ATEHLIQKGR KQQPVNLIEL LEAAATTSIS QGFEGIWDFD SDEVVSLASG 480
  481 EPPNSWALPL VTLTSIAVAL PNVKPCSLKK LVKAVNEALV YVKKFEDVLD TEGELANSRK 540
  541 AAEVVWLGVD LYHKWLDVDL RKLSKQQKTT RQVLEEMVGL AKKEFTELWQ KNLIFCMKHK 600
  601 PSHWPIKTLA ANSMYRISQT LLNKYGSRDV GTEEEALLKD VERMVLDIVA GCFCNAAQVI 660
  661 GMKCLVTAVE VREESVREAA MHLGRTEKIL EIVDRRCMPA LSHHEVAKID EWREFYRTNR 720
  721 CSISLTRPSS QCTTRDLILN LE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle