YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89257550
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGVGENQLI SIVPDELKFL CKHYYSPISD VELEKQSYCD LKVANKTEDY VAFKVKTTSP  60
   61 KKYFVRPNTG VIQPWDSCII RVTLQAQREY PPDMQCKDKF LLQSTIVPPH TDVDDLPQDT 120
  121 FTKDSGKTLT ECKLKVSYIS PSTTQRSSES GAINGDGNGS ETISTIQRLK EERDAAVKQT 180
  181 QQLQHELEMV KRRRNQSNSG LSLKLAALVG LIGLIIGFIL KLTLASPT

Type	Start	End	Confidence
Cytoplasmic	1	200	0.83
Transmembrane Helix	201	222	0.93
Non-Cytoplasmic	223	228	0.68