YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84104907
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPSSTSNN SALPPVAASG ATTPGAGAPC AACKFLRRKC LPGCVFAPYF PPEEPQKFAN  60
   61 VHKVFGASNV TKLLNELLPH QREDAVSSLA YEAEARVKDP VYGCVGAISV LQRQVHRLQK 120
  121 ELDAAHAELL RYACGDVAAG IPTALPVSVS VSAAPRLSTA MTTSPGQFAA AAATAHATAG 180
  181 MYGSSRRLGV LDGVVAAPPP PPPAGGCYFM RNHSNVISSP PGADVAPVLP YASMANWAVN 240
  241 AISASTTTTS GSESIGGLDH KEGGDSSM

Type	Start	End	Confidence
Signal Peptide	1	32	0.90
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	268	0.98