YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84104905
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPSSTGNS IVSVVVAAAT TPGAGAPCAA CKFLRRKCLP GCVFAPYFPP EEPQKFANVH  60
   61 KVFGASNVTK LLNELPPHQR EDAVSSLAYE AEARVKDPVY GCVGAISVLQ RQVHRLQKEL 120
  121 DAAHTELLRY ACGELGSIPT ALPVVTAGVP SGRLSSAVMP CPGQLAGGMY SGGGGGGFRR 180
  181 LGLVDAIVPQ PPLSAGCYYN MRSNNNAGGS VAADVAPVQI PYASMANWAV NAISTITTTS 240
  241 GSESIGMDHK EGGDSSM

Type	Start	End	Confidence
Signal Peptide	1	30	0.95
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	257	0.99