YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88771159
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVMAMPVKP ASSRAAHLCI VWLVVSTLLL QSTDAFIWMK PKHPKPCWNK VLYFHDILYN  60
   61 GKNAKNATSA IVAAPQGANL TILTGNNHFG DLVVFDDPIT LDNNLHSPPV GRAQGFYFYD 120
  121 MKKTFSAWLG FTFVLNSTDH RGTITFTGAD PILTKYRDIS VVGGTGDFLM ARGIATISTD 180
  181 AFEGEVYFRL RVNITLYEGY HSLYSVTASD DSASQNRKWK SVLA

Type	Start	End	Confidence
Signal Peptide	1	35	0.97
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	224	0.99