YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82466302
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EYKPASERAS ILFFVLMDMS KIDPMYVFSL AAYILLFTQS IERSPRNQLV HERIQNINEY  60
   61 HSYAVYRNTC RGLFERHKLL FSIHMTAKIL SNAGKLLEEE YDFILKGGIV LDKLGQAPNP 120
  121 APWWISEQNW DNITELDKVS GFHGIIDSFE QHYKAWNGSW YATTFPEQED LVGEWNDKLT 180
  181 DFQKICVLRS LRPDRISFCL TQFIITKLGP RYVDPPV

Type	Start	End	Confidence
Cytoplasmic	1	18	0.53
Transmembrane Helix	19	37	0.63
Non-Cytoplasmic	38	217	0.89