YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116696224, gi...
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYLDHAGAR LFYTVDGPES APAILFSNSL GTDHTMWEPQ AAALAGRYRV VRYDTRGHGR  60
   61 STAPGDAFTV AQLGQDVIAI LDALGIGQAV FCGLSMGGLT GMWLGIHAPQ RFSHIVLANT 120
  121 AAKIGNADGW NTRIETVRRE GMAVMVAPSV ERWFTPEFAA TAERALDGLR DVLAGLAPRG 180
  181 YAASCAAVRD ADFRESVASI QVPVLVIAGS QDPSTPAQEG RALADAIPGA RFVELPAAHI 240
  241 SSFEQPGRFT AALLDFVRGR LPVTDDHARY DAGLAVRREV LGSAHVDRSL ARLTPLNEEF 300
  301 QHLITRYAWG EIWTREGLPR HTRSLLTIAM MVALNRAEEL KLHLRAAANN GVTRDEIKEV 360
  361 LLQAAIYCGV PAANSAFHLA EEVFAEIDQA G

Type	Start	End	Confidence
Cytoplasmic	1	83	0.68
Transmembrane Helix	84	106	0.71
Non-Cytoplasmic	107	391	0.88