YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113530526, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTSIKSLIS AGVIALGLMS ALHAQASVVI AGTRVIYKAK DTETTIKLTN EGQSPALTQA  60
   61 WIDKGDAKAA PSSIDVPFTV TPPVSRIDPK KGQTLRIIYT GEPLPQDRES VFWLNVLEIP 120
  121 PKPTAEEADV NKLQLAFRSR IKLFFRPAGL EGNADDAPGS ISWRVTHAGG KPALEASNPS 180
  181 KYHVSFANLE LVGGGKTAKF EEGGMVGPGE AKTFPLTGDV AQGTEARVRY KAINDYGGAV 240
  241 SGEAALGSSA TKAASR

Type	Start	End	Confidence
Signal Peptide	1	26	0.97
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	256	0.99