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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116694983, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDNQPVTQR EFDFPDNATL MSTTDTQSYI TYANAAFVEV SGFTREEIQG QPHNLVRHPD  60
   61 MPAEAFADMW ATLKGGEPWT ALVKNRRKNG DHYWVRANAT PVVRNGRPAG YMSVRTKATR 120
  121 EEIAAAEKLY RDFREGQAGS RKFHKGLIVR TGLMAFTSLF QTMPVRWRVR LALAALLPVS 180
  181 IIGAWGMGLS GMALPGFAGV MALATLLASW WLQRQITTPL EQVLQQALRV ASGESQKAVH 240
  241 MNRVDEIGMT LRTISQLGLM FRWLIDDVSG QVVNVQTASN EIARGNIDLS ARTEQAASSV 300
  301 QETSASMAQM TSTVQSNAET AAQANKLSGS ASVAAERGGQ AVSEVVNTMN EITESSRRIA 360
  361 DIIGVIDGIA FQTNILALNA AVEAARAGEQ GRGFAVVAGE VRSLAQRSAN AAKEIKGLID 420
  421 VSVHNVASGA KLVDEAGKAM DDIVSQVKRV SDLIAEISAA TTEQSSGISQ VGGAVSDLDN 480
  481 ITQQNAALVE QSAAAAESLK QQATRLVEAV SVFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle