YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113529472, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAHDETLDS HGHSHGHDED VGPHATLGGY LTGFVLSVFL TAIPFWLVMG KVFDKSSTTA  60
   61 IVILLIGAVQ IVVHMIYFLH MNARSEGGWN MLSLMFTLVL VVITLTGSLW VMFHLNSNMM 120
  121 PTMQHERTTD AGTAIVPPRT K

Type	Start	End	Confidence
Non-Cytoplasmic	1	26	0.73
Transmembrane Helix	27	49	0.90
Cytoplasmic	50	57	0.68
Transmembrane Helix	58	78	0.94
Non-Cytoplasmic	79	91	0.64
Transmembrane Helix	92	113	0.93
Cytoplasmic	114	141	0.73