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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113528707, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNALSNLFNL PGLRSAGQLK AMTGPLLIIM ILGMMILPLP AFVLDLLFTF NIALAIMVLL  60
   61 VSMYTQKPLD FAAFPAVLLF TTLLRLSLNV ASTRVVLLEG HTGPDAAGKV VEAFGHFLVG 120
  121 GNFAVGIVVF AILVVINFMV ITKGAGRIAE VGARFMLDSM PGKQMSIDAD LNAGLIDEAA 180
  181 AKKRRAEVAQ ESDFYGAMDG ASKFVRGDAV AGLLIMFINV AAGMVVGMVQ HDLDFGTAVH 240
  241 NYTLLTIGDG LVAQIPALVI STAAGVIVSR VSNEQDVGEQ LTGQLFANPR VLYLTAGIIG 300
  301 LMGIIPGMPH FAFLLLAGAL VWMGRYMSRR AATQEQVKQR EERTPAVAQE STEASWDDVT 360
  361 LVDPLGMEVG YRLITLVDRA QDGELLGRIK SIRKKVAQEI GFLVPVVHIR DNLELKPNAY 420
  421 RITLKGVEIG RGEAMPGQWM AINPGQVSGT LPGAATRDPA FGLPAVWIDA GIKEQAQSYG 480
  481 YTVVDASTVV ATHLNHLIHM HAAELLGRQE VQALLDRIAK DSPKLTEDLV PKAISLTALQ 540
  541 KILQNLLDEG VPIRDMRTIL DVVAEHAPKI SDPNELTAMV RVALGRAITQ QLFPNNADLQ 600
  601 VIGLDAGLER VLSQALTNGG GIEPGLADAL LQQTQGAVTR QEQLGMDPVL LVPSQLRPLM 660
  661 ARFLRRTMPQ LRVLSHAEVP DNRNIRITAM IGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle