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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86553064
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGYNNKLS LIALVLCVSA LLFNLVHARP PFACDPRNPL TRGFKFCRTR VPVHVRVQDL  60
   61 IGRLTLQEKI RLLVNNAIAV PRLGIQGYEW WSEALHGVSN VGPGTKFGGA FPGATSFPQV 120
  121 ITTAASFNQS LWQEIGQVVS DEARAMYNGG QAGLTYWSPN VNIFRDPRWG RGQETPGEDP 180
  181 VLSAKYAASY VKGLQGDGAG NRLKVAACCK HYTAYDLDNW NGVDRFHFNA RVSKQDLADT 240
  241 YDVPFRGCVL EGKVASVMCS YNQVNGKPTC ADPDLLKNTI RGEWKLNGYI VSDCDSVGVF 300
  301 YDQQHYTRTP EEAAAEAIKA GLDLDCGPFL AIHTEGAIKA GLLPEIDVDY ALANTLTVQM 360
  361 RLGMFDGEPS AQQYGNLGPR DVCTPAHQEL ALEASRQGIV LLQNNGHTLP LSTVRHRTVA 420
  421 VVGPNSDVTE TMIGNYAGVA CGYTTPLQGI GRYTKTIHQQ GCTNVACTTN QLFGAAEAAA 480
  481 RQADATVLVM GLDQSIEAEF RDRTDLVMPG HQQELVSRVA RASRGPTVLV LMSGGPIDVS 540
  541 FAKNDPKIGA IIWVGYPGQA GGTAMADVLF GTTNPSGKLP MTWYPQDYVS KVPMTNMAMR 600
  601 AGRGYPGRTY RFYKGPVVFP FGLGLSYTTF AHSLAQVPTS VSVPLTSLSA TTNSTMLSSA 660
  661 VRVSHTNCNP LSLALHVVVK NTGARDGTHT LLVFSSPPSG KWAANKQLVG FHKVHIVAGS 720
  721 HKRVKVDVHV CKHLSVVDQF GIRRIPIGEH KLQIGDLEHH ISVEANVGEI RS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle