YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113431910
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LNSTLLPHPV LLASLLCSCI LLSAAMPSQL ESSMQSLITV FHCYADKDGD CNTLSKKELK  60
   61 ELMQTELASF LKSQKDPAAI DKIMKDLDQN GDGKVSFEEF VSLVVGLSIA CEQIYQLHTK 120
  121 KVAAKEVKED RTRRKRSRDG FFIYVISINK SYCCE

Type	Start	End	Confidence
Cytoplasmic	1	7	0.65
Transmembrane Helix	8	27	0.85
Non-Cytoplasmic	28	155	0.82