YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|112182831
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTSLRWGS TFLVVLIIFQ CVCVMFYKQN TPSFGDVMTD TFQKMGCAKL RHKFSVIKPA  60
   61 KSIKFKSFAR EVSDFLSCPY KSNETEQELN RIRLRFCCNA TESFVLTKRN TAISQSIPYE 120
  121 TNSRRTYKMN ADVHKLLPED SPWSAGALGL CAVVGSSGIL KNSSCGRQID SADYVIRFNL 180
  181 ALINDSDVGL KTNLITINPS QIRGYRNLEK KPGPLVKRVS VYGNSSLIIP AFAYVICTSP 240
  241 SLRVLRVLQP IRPQQPVLFF SPHYLRALDR FWKGRGLKER RLSTGFMLIS AALEMCEHVH 300
  301 VYGFWPFGTD LQENPIPYHY YDQMRSGSVH RMPEEFLRLL QLHSQGALTL HLQPCDTH

Type	Start	End	Confidence
Signal Peptide	1	23	0.62
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	358	0.86