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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108755190
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.19
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFSRNLALW VIIALLVFSL FNLFQGSSRQ GPQEQLAFSD FVTAVESGEI RDVTMQGNTI  60
   61 TGHYKDGRNF STYAPDDANL VAKLTEGRVR ISAVPADDGT PTFWGILISW FPMLLLIGVW 120
  121 IFFMRQMQSG GGRAMGFGKS KARLLTEKST RVTFDDVAGI DEAKQEVEEI IDFLKDPQKF 180
  181 QRLGGKLPKG CLLVGPPGTG KTLLARAIAG EANVPFFTIS GSDFVEMFVG VGASRVRDMF 240
  241 EQGKKNAPCI IFIDELDAVG RHRGAGLGGG NDEREQTLNQ LLVEMDGFES NEGVILISAT 300
  301 NRPDVLDPAL LRPGRFDRQV VVPNPDILGR EKIMKVHMRK VPLAPDVDAR VIARGTPGFS 360
  361 GADLANLVNE AALLAARRGR RVVTMDEFEA AKDKVMMGPE RRSMVMTDEE KKLTAYHEAG 420
  421 HALVALYVPK HDPLHKVTII PRGRALGVTL TLPERDRYSN SKVELKSRLA MMFGGRVAEE 480
  481 IIFGPENVTT GAGDDIKQAT ALARRMVTEF GFSEKLGTLR YAENEEEIFL GHSVTQRKNV 540
  541 SDATAKIIDE EIRGLIDEAG ATARAILEEH RDDLETLGEA LLEYETLTGD EVKALLRGES 600
  601 IVRPEEDEAP KDPGRGASVP ASGRKAKEHP GPLKTAPQPE S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle