YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94734027
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.36
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLEWATCGG FPYLCYRNGG WAFLIPYLMF VVTCGVPLFL LETAMGQFTQ QGAITCWHHL  60
   61 CPLAGRIGYA GQLKVVYGCM YYIIILAWAL FYLIYCFSSQ LPWASCDNIW NT

Type	Start	End	Confidence
Cytoplasmic	1	19	0.60
Transmembrane Helix	20	41	0.93
Non-Cytoplasmic	42	53	0.47
Transmembrane Helix	54	69	0.36
Cytoplasmic	70	74	0.51
Transmembrane Helix	75	97	0.85
Non-Cytoplasmic	98	112	0.55