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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94733876
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETLLPAVEVC ASLSQRLGMC LVYGRAPGAL LLLLLALVLN TSCSLDSAAE WEKDPAYWND  60
   61 QARRTLQTAL TLPLRVNRAK NIILFVGDGM GVSTVSAARI LRGQMEGQSG EETILAMDTF 120
  121 PYLALSKTYC VDKQVADSAS TATAYHCGVK ANAKTVGLSA KAVAYECNTT FGNEVFSVLH 180
  181 RAKAQGKSVG IVTTTRVQHA SPAAAYAHSV SRKWYSDADV PSEARRQGCK DIATQLVTNT 240
  241 DIDVILGGGR MYMTPKGTPD PEYSSSSHKG DRKDKKNLIN VWLNARKGRN AQYVWNKEQF 300
  301 NAVDVQTTDC LMGLFEPKDM RFEVFRNRTR DPSIVDMTEK AIQILSKNPK GFFLFVEDEC 360
  361 LSFPVVLLRK LYIRLTAEHV CVLRGRIDHG HHDGVAKLAL TETIMFDRAI QRASELTSES 420
  421 DTLTVVTADH SHVFTFGGKT PRGNPIFGLA PKQAEDDLPY TSILYANGPG YDHVNGTRGN 480
  481 VSVLDYYDEE YKQQAAVPLE SETHGGEDVA IYAKGPMAHL FHGVKEQNYV AHAMAYAACL 540
  541 EPYTNCPLDL YSSAGWKTPL SLTLISLTGV FWLVLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle