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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94733851
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YFGHDCGKCP GTLDNWCSNN GQCEDGLHGT GKCLCNEGFH GTACEMCEPG RYGKDCKSEC  60
   61 HCEHGKCLDG LEGNGQCICF KGWKGVKCSV VVVDDACGGV CDVNANCISG DSGTPPTCSC 120
  121 TAGYKGNGTS CEEINPCAED NGGCSVNANC TKTAPGERTC TCTTNYIGDG VICVEMDACL 180
  181 VNNGGCDENA ICMKTGPNRV CVACACRPGF ISQGHRCLAV NPCRKDNGGC SVNAVCRYLG 240
  241 AGERNCTCYI GFKGDGLQCA GTAFRFRDWV GRGPFTVFVP HADYVTNFSN PQVDSWINSS 300
  301 HSSELLRYHI VSCEELHLSD LKSVKEVVTA NGYKLRFSVR DGVVYINDNT KIITSDIECS 360
  361 NGILHYIDKV LIPYDITGKA EISTNLNITA AAEQYGFKMF GKLLQDAGLM HVVQHRAFYP 420
  421 FTMFWPTDDV FNNLTEDRKT WLYSEDHRDK LQGYLKAHIV RDERIAAIGL PTEKRLQTLF 480
  481 GSEITFSCNK DLIGDILING NNARIVNRNM LFDSGIAHGI DQLLEPPSIG ARCDDFRSIE 540
  541 IKGRCGSCLS PPLCPYGSTD MCNMAVYQHC LEVCIGPRLQ NLCLNVPPVM IYRSYRDFLG 600
  601 CDRVCTKLTW DTKCCKNHFG RDCQVCSGGL EAPCGEHGDC DDGQGGTGVC KCHTGFTGKG 660
  661 CELCLANHFG PNCTACNCTI HGKCDEGLDG DGSCFCQEGW MGESCQTAIE VKSICSPACD 720
  721 LNAVCLPENQ CECLEPYEGN GINCTAPDLC SEYNGGCHEE ADCMQSGINI TCSCQTGYSG 780
  781 DGHVCEPINR CVEEANGGCS DFAKCIFTGP NERRCQCLDG YVGNGVQCLE KVVPPVDRCL 840
  841 EDNGGCDPKA ICRDLHFHTK TAGVFHLRSP EGKYKMNFTQ AKQACEAEGA NLATFSQLSD 900
  901 AQQLGMHLCV AGWMDGEKAG YPIRFPSAKC GDNHVGIVVY KDPVNSSWLY DAYCYRMNEV 960
  961 ACECGAGYVG SGAFCNGDLA SVVATTSNFS VFYTNLLKYA EDGEDGKTLL KALSDKSLNM1020
 1021 TIFIPQNNGF GANKTLSWRD LQYHISSVNN IHYYENLKHN TAIPSRLGSK LIITIPSNSS1080
 1081 GQTEDAQPQK LVNKKVILAW NIPAINGLIH VIDGPFRAPP VPVPAVLPIT QSSGVAVTTV1140
 1141 LVVIAIVCIV AGLAYYVLRH KNDAFRFQYF KNDDEDGAST KAGGNALVSI PNPLYSGYRA1200
 1201 FAEPFGDSAA TDTPNLID

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle