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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94733615, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CAIIRPPRDG GIRYRGLTQE QIRSVQVLPV DYEIEYICRG SRVIVGPKVR KCLPDGTWTD  60
   61 LNQRSKCLLP CPRVWTSLEN GRVTVHPPGP AVEGTILHYS CLEGFILVGR NSTQCNKLGK 120
  121 WDSPKPVCHC KKKLYIGALF PMSGGWPGGQ ACLPAAQMAL DLVNKRTDIL PDYELELIHY 180
  181 DSMCDPGEAT KLLYDLLYTE PIKIVLMPGC SSVSTLVAEA ARMWNLIVLS YGSSSPALSN 240
  241 RQRFPTFFRT HPSATLHNPT RVQLFQKWKW TKIATIQQTT EVFTSTLDDL EQRVKEAGIE 300
  301 ISVRQSFLTD PAVAVKNLKR QDARIIVGLF YETEARKVFC EVYKEKLYGK KYVWFLIGWY 360
  361 ADNWFKIKDP SINCTVEQMT EAVEGHVTTE IVMLNPETVR GASNLTSQEF LAQLMSKLGG 420
  421 KNPEETGGFQ EAPLAYDAVW ALALALNKTV GPLKAKGRRL EDFNYNNKDI TAEIYRALNT 480
  481 SSFEGVSGHV VFDAQGSRMA WTLIEQLQGG SYKKIGYYDM TKGNLSWYGN DRWIGSGPPA 540
  541 DQTVVIQKFR YLSQKLFVSV SVFAGLGILM GIVCLTFNIY NSNVRYIQNS QPYLNNMTAV 600
  601 GCMMALAAVF PLGIDGLHVR NSQFPVVCQF RLWLLGLGFS LAYGSMFTKI WWVHTVFTKK 660
  661 DEKKDKRKQH LEPWKLYATV GVLLVIDILS LMIWQIVDPL HITVEKFTKE APKGDVDELI 720
  721 EPLLQHCSSE KMNTWLGVVY GYKGLLLLLG IFLAYETKSV STEKINDHRA VGMAIYNVSV 780
  781 LCMITAPVTM ILSSKQDASF AFASLAIIFS VYITLVVLFV PKMRRLITRG EWQSDQQETM 840
  841 KTGSSTNNND EEKSRQLERE NKELQKIIQE KEERVSELRN QLSERQALRS RKRPTSNQNH 900
  901 SSPSIPTPQN DPKSLLPPPG YPLPSSDNHS FSNSSPLYQP DGKINRNNCH PGRLQLLYK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle